Workshop
Learning Meaningful Representations of Life (LMRL.org)
Elizabeth Wood · Debora Marks · Ray Jones · Adji Bousso Dieng · Alan Aspuru-Guzik · Anshul Kundaje · Barbara Engelhardt · Chang Liu · Edward Boyden · Kresten Lindorff-Larsen · Mor Nitzan · Smita Krishnaswamy · Wouter Boomsma · Yixin Wang · David Van Valen · Orr Ashenberg
Fri 11 Dec, 6 a.m. PST
This workshop is designed to bring together trainees and experts in machine learning with those in the very forefront of biological research today for this purpose. Our full-day workshop will advance the joint project of the CS and biology communities with the goal of "Learning Meaningful Representations of Life" (LMRL), emphasizing interpretable representation learning of structure and principle. As last year, the workshop will be oriented around four layers of biological abstraction: molecule, cell, synthetic biology, and phenotypes.
Mapping structural molecular detail to organismal phenotype and function; predicting emergent effects of human genetic variation; and designing novel interventions including prevention, diagnostics, therapeutics, and the development of new synthetic biotechnologies for causal investigations are just some of the challenges that hinge on appropriate formal structures to make them accessible to the broadest possible community of computer scientists, statisticians, and their tools.
Schedule
Fri 12:00 a.m. - 11:59 a.m.
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Meet in Gather.town ( All-day event ) > link | 🔗 |
Fri 12:00 a.m. - 11:59 p.m.
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Join the Discussion in Slack ( All-day event ) > link | 🔗 |
Fri 5:00 a.m. - 5:24 a.m.
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Hilary Finucane
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Pre-Recorded Talk
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Hilary Finucane 🔗 |
Fri 5:25 a.m. - 5:40 a.m.
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Live Discussion with Jacob Ulirsch (Finucane Lab)
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Post-talk Q&A with Jacob Ulirsch in Person
)
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Fri 5:40 a.m. - 6:20 a.m.
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Daniela Witten
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Pre-Recorded Talk
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SlidesLive Video |
Daniela M Witten 🔗 |
Fri 6:20 a.m. - 7:00 a.m.
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Poster Session I - All Posters
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Poster Session
)
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Fri 7:00 a.m. - 7:15 a.m.
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Timothy Springer ( Opening Remarks: Timothy Springer (Prerecorded) ) > link | 🔗 |
Fri 7:15 a.m. - 8:00 a.m.
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Cell Panel
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Cell Panel: Live with Mor Nitzan, Raveh, Keren and Zeevi
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Fri 8:00 a.m. - 8:30 a.m.
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Christina Leslie
(
Opening Remarks: Live with Christina Leslie in Person
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Christina Leslie 🔗 |
Fri 8:00 a.m. - 8:22 a.m.
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David Ryan Koes
(
Molecule Talk: Pre-Recorded
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SlidesLive Video |
David Koes 🔗 |
Fri 8:00 a.m. - 8:27 a.m.
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Viviana Gradinaru
(
Synth Talk: Pre-Recorded
)
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SlidesLive Video |
Viviana Gradinaru 🔗 |
Fri 8:00 a.m. - 8:37 a.m.
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Akiko Iwasaki ( Phenotype Talk: Pre-Recorded ) > link | Akiko Iwasaki 🔗 |
Fri 8:00 a.m. - 8:21 a.m.
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Barak Raveh
(
Cell Talk: Pre-Recorded
)
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SlidesLive Video |
Barak Raveh 🔗 |
Fri 8:21 a.m. - 8:42 a.m.
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Leeat Keren
(
Cell Talk: Pre-Recorded
)
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SlidesLive Video |
Leeat Keren 🔗 |
Fri 8:22 a.m. - 8:44 a.m.
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Cecilia Clementi
(
Molecule Talk: Pre-Recorded with Cecilia Clementi Live in Person
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SlidesLive Video |
Cecilia Clementi 🔗 |
Fri 8:30 a.m. - 9:09 a.m.
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Tamara Broderick
(
Recorded Talk with Tamara Broderick Live in Person
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SlidesLive Video |
Tamara Broderick 🔗 |
Fri 8:30 a.m. - 9:10 a.m.
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Jose Miguel Hernandez Lobato ( Synth Talk: Pre-Recorded with Hernandez Lobato Live in Person ) > link | José Miguel Hernández-Lobato 🔗 |
Fri 8:37 a.m. - 9:18 a.m.
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Eran Segal ( Phenotype Talk: Pre-Recorded ) > link | Eran Segal 🔗 |
Fri 8:42 a.m. - 9:03 a.m.
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David Zeevi
(
Cell Talk: Pre-Recorded
)
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SlidesLive Video |
David Zeevi 🔗 |
Fri 8:44 a.m. - 9:05 a.m.
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Pedro Beltrao
(
Molecule Talk: Pre-Recorded
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SlidesLive Video |
Pedro Beltrao 🔗 |
Fri 9:04 a.m. - 9:24 a.m.
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Jesse Bloom
(
Cell Talk: Pre-Recorded
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SlidesLive Video |
Jesse Bloom 🔗 |
Fri 9:09 a.m. - 9:20 a.m.
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Tamara Broderick
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Discussion with Tamara Broderick Live in Person
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Fri 9:10 a.m. - 9:20 a.m.
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Hattie Chung
(
Synth Talk: Pre-Recorded
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SlidesLive Video |
Hattie Chung 🔗 |
Fri 9:18 a.m. - 10:00 a.m.
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Harlan Krumholz
(
Phenotype Talk: Pre-Recorded
)
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SlidesLive Video |
Harlan Krumholz 🔗 |
Fri 9:20 a.m. - 10:00 a.m.
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Chang Liu
(
Synth Talk: Live Talk with Chang Liu in Person
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Chang Liu 🔗 |
Fri 9:25 a.m. - 10:00 a.m.
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Geoffrey Schiebinger
(
Cell Talk: Pre-Recorded
)
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SlidesLive Video |
Geoffrey Schiebinger 🔗 |
Fri 9:25 a.m. - 10:00 a.m.
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Christine Peter
(
Molecule Talk: Recorded talk with Christine Peter Live in Person
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SlidesLive Video |
Christine Peter 🔗 |
Fri 9:34 a.m. - 10:00 a.m.
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John Chodera
(
Molecule Talk: Pre-Recorded with John Chodera Live in Person
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SlidesLive Video |
John Chodera 🔗 |
Fri 10:00 a.m. - 10:35 a.m.
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Eli Weinstein
(
Synth Talk: Recorded Talk with Eli Weinstein Live in Person
)
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SlidesLive Video |
Eli Weinstein 🔗 |
Fri 10:00 a.m. - 10:06 a.m.
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Hirunima Jayasekara
(
Phenotype Talk: Pre-Recorded
)
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SlidesLive Video |
Hirunima Jayasekara 🔗 |
Fri 10:00 a.m. - 11:00 a.m.
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Phenotype Panel
(
Phenotype Panel: Live with Iwasaki, Segal and Krumholz
)
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Fri 10:00 a.m. - 10:40 a.m.
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Samantha Riesenfeld
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Live Talk with Samantha Riesenfeld in Person
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Samantha Riesenfeld 🔗 |
Fri 10:06 a.m. - 10:32 a.m.
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Caroline Weis
(
Phenotype Talk: Pre-Recorded with Caroline Weis Live in Person
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SlidesLive Video |
Caroline Weis 🔗 |
Fri 10:10 a.m. - 10:10 a.m.
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Maria Littmann
(
Molecule Talk: Recorded talk with Maria Littman Live in Person
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SlidesLive Video |
Maria Littmann 🔗 |
Fri 10:15 a.m. - 10:30 a.m.
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Martin Voegele
(
Molecule Talk: Pre-Recorded with Martin Voegele Live in Person
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SlidesLive Video |
Martin Voegele 🔗 |
Fri 10:30 a.m. - 10:42 a.m.
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James Morton
(
Molecule Talk: Pre-Recorded
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SlidesLive Video |
James Morton 🔗 |
Fri 10:32 a.m. - 10:36 a.m.
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Manik Kuchroo
(
Phenotype Talk: Pre-Recorded
)
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SlidesLive Video |
Manik Kuchroo 🔗 |
Fri 10:35 a.m. - 11:00 a.m.
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Surojit Biswas
(
Synth Talk: Pre-Recorded with Surojit Biswas Live in Person
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SlidesLive Video |
Surojit Biswas · Surge Biswas 🔗 |
Fri 10:36 a.m. - 10:55 a.m.
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Claus Hélix-Nielsen
(
Synth Talk: Live Talk with Claus Hélix-Nielsen in Person
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Fri 10:40 a.m. - 11:00 a.m.
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Juan Caicedo and Shantanu Singh
(
Cell Talk: Live Q&A with Caicedo and Singh
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>
link
SlidesLive Video |
Shantanu Singh · Juan Caicedo 🔗 |
Fri 10:42 a.m. - 10:54 a.m.
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Max Shen
(
Molecule Talk: Pre-Recorded
)
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SlidesLive Video |
Max Shen 🔗 |
Fri 10:54 a.m. - 11:04 a.m.
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Eli Draizen
(
Molecule Talk: Pre-Recorded
)
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SlidesLive Video |
Eli Draizen 🔗 |
Fri 11:00 a.m. - 12:00 p.m.
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David Baker
(
Live Talk with David Baker in Person
)
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David Baker 🔗 |
Fri 12:10 p.m. - 12:45 p.m.
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Pamela Silver and Debora Marks
(
Live in Conversation with Pamela Silver and Debora Marks
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Fri 12:30 p.m. - 1:15 p.m.
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Jennifer Listgarten
(
Live Talk with Jennifer Listgarten in Person
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Jennifer Listgarten 🔗 |
Fri 1:20 p.m. - 2:00 p.m.
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Sri Kosuri ( Synth Talk: Pre-Recorded ) > link | 🔗 |
Fri 1:45 p.m. - 2:00 p.m.
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Sri Kosuri
(
Discussion with Sri Kosuri Live in Person
)
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Fri 2:00 p.m. - 3:00 p.m.
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Poster Session II - All Posters
(
Poster Session
)
>
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🔗 |